PCI DSS vs. 3D Secure: Do You Need Both for Card Payment Security?

In today’s digital commerce environment, payment security is a top priority. Two terms that often come up are PCI DSS (Payment Card Industry Data Security Standard) and 3D Secure (sometimes “3-D Secure”, “3DS”, “3-D Secure Protocol”). They both aim to reduce fraud, protect cardholder data, and build trust — but they serve different roles. Understanding their differences, overlaps, and whether you need one or both is essential for any merchant handling card payments (especially online).

In this post we’ll compare PCI DSS and 3D Secure (or EMV 3DS), look at their benefits, limitations, and explore when and why you might implement both together for robust payment security.

What is PCI DSS?

PCI DSS (Payment Card Industry Data Security Standard) is a globally adopted set of requirements created by the PCI Security Standards Council (SSC).

Key points:

  • Applies wherever cardholder data (credit, debit) or sensitive authentication data (like full track data, PINs, etc.) is stored, processed, or transmitted.
  • Contains a set of baseline security controls: network security, encryption, access controls, vulnerability management, logging, physical security, etc.
  • Applies to merchants, service providers, processors — any entity in the chain that handles such data.
  • Compliance is often validated annually (through audits) or via self‐assessment, depending on size/volume. 

Purpose: To reduce risk of data breaches, theft of payment data (card numbers, CVV, etc.), and to maintain trust of consumers, regulators, and payment networks.

What is 3D Secure?

3-D Secure (EMV 3-D Secure, 3DS) is an authentication protocol for card-not-present (CNP) transactions — i.e. mostly online or mobile commerce — that adds an extra layer of identity verification. 

Key points:

  • “Three domains” refers to the merchant/acquirer domain, issuer domain, and the interoperability domain (payment scheme/infrastructure) that communicate during authentication.
  • Commonly, during checkout, after entering card details, the customer is prompted for additional verification: OTP (one-time password), biometric, or sometimes static password or push notification by the issuer. This step helps ensure that the person using the card is actually the legitimate cardholder.
  • Helps reduce fraud in online transactions by preventing unauthorized card use in CNP scenarios.
  • Evolving over versions (EMVCo specification) to make authentication more seamless, reduce friction, and incorporate risk-based or “frictionless” flows when risk is low.

Differences Between PCI DSS and 3D Secure

  1. Scope
    PCI DSS secures cardholder data wherever it is stored, processed, or transmitted. 3D Secure only authenticates cardholders during online or card-not-present transactions.
  2. Goal
    PCI DSS aims to protect payment data and prevent breaches. 3D Secure aims to reduce online fraud by verifying the cardholder’s identity.
  3. Regulatory / Compliance Nature
    PCI DSS is mandatory for all merchants handling card data and non-compliance can lead to penalties. 3D Secure is sometimes required for high-risk or regional transactions but is not always mandatory.
  4. Implementation
    PCI DSS involves controls like encryption, firewalls, access restrictions, and monitoring. 3D Secure requires integration at checkout with issuers, acquirers, and payment gateways.
  5. Where It Helps
    PCI DSS protects card data and systems from theft and breaches. 3D Secure reduces fraudulent online purchases and may shift liability to issuers.
  6. Overlaps / Intersections
    If merchants operate 3DS servers or store authentication data, PCI DSS may also apply. 3D Secure alone cannot replace PCI DSS, as it doesn’t cover system or data security.

Do You Need Both?

Short answer: Yes, in many cases you do need both—or at least you benefit significantly from using them both—depending on your business type, transaction volume, risk exposure, and regulatory / card-network agreements.

Here’s when both are useful, and when one might suffice or where trade-offs exist.

When PCI DSS Alone Might Be Insufficient

  • If you’re doing eCommerce / card not present transactions, fraud risk is higher. Having just PCI DSS (which protects data at rest, in transit, etc.) doesn’t stop stolen cards being used by someone else.
  • A data breach may expose cardholder information even if you don’t yet have authentication controls. While PCI DSS helps prevent that exposure, once the data is stolen you still risk fraud.
  • Without an authentication layer (like 3DS), you may be more exposed to chargebacks or fraudulent transactions, particularly as regulatory bodies / card schemes increasingly push for “strong customer authentication” (e.g. under PSD2 in Europe).

When 3D Secure Alone Might Be Insufficient

  • 3DS addresses authentication but not the full spectrum of data security practices: e.g. encryption of stored card data, secure server configuration, network segmentation, logging, vulnerability scanning etc. These are under PCI DSS.
  • Even with 3DS, if your system is compromised and card data is leaked, you’ll still need to meet data protection and regulatory demands.
  • 3DS integration can add friction: cart abandonment, user experience issues, fallback flows when issuer doesn’t support it etc. So if done poorly, you might lose customers or conversions.

Synergy: When Using Both Makes Sense / Is Required

  • Many payment brands or issuer/acquirer agreements require you to maintain PCI DSS compliance and, in certain regions or transaction types, use 3D Secure (or equivalent strong authentication).
  • Using 3DS can help reduce liability in the event of fraudulent transactions (in many cases, liability shifts from merchant to issuer if proper authentication was in place).
  • Compliance with PCI DSS ensures your infrastructure is secure; 3DS ensures transaction-level protection. Together, they’re complementary: one protects the data environment, the other protects the transaction integrity/authentication.
  • For high risk industries (travel, digital goods, subscription services, cross-border eCommerce), or where regulatory regimes enforce strong authentication (for example Europe’s PSD2, some jurisdictions in Asia), both are nearly mandatory.

Costs, Trade-offs & Practical Considerations

Implementing PCI DSS and 3D Secure both come with costs, complexity, and operational trade-offs. Consider:

  • Cost & Time: PCI DSS compliance (especially for large or complex environments) can be expensive — audits, secure architecture, monitoring. 3DS implementation includes integration work, possibly dealing with multiple issuers, fallback or challenge flows.
  • Customer Experience: 3DS (especially older versions) can slow checkout, frustrate customers; newer risk-based and frictionless flows reduce impact.
  • Complexity & Maintenance: Both standards evolve: PCI DSS has versions (v3.x, v4.0 etc.), 3DS specs evolve. Keeping up with updates, patches, new requirements is ongoing work.
  • Fallback & Coverage: Not all cards/issuers support 3DS, or support latest version; sometimes authentication fails. So you need fallback mechanisms that don’t degrade security too much.
  • Risk Tolerance & Business Size: Smaller merchants with low transaction volumes may decide whether the extra cost of full compliance (or full 3DS) is justified vs risk. But even smaller merchants are often required by their payment processors to maintain a minimum PCI level and may be encouraged or required to adopt 3DS.

Regulatory & Industry Trends

To understand whether you must use both, it helps to look at broader trends:

  • Strong Customer Authentication (SCA) requirements in many jurisdictions (e.g. European PSD2, and similar regulatory frameworks elsewhere) are pushing more merchants to use multi-factor / strong authentication in online payments. 3DS (or equivalent) is a common way to meet such requirements.

  • Card networks (Visa, Mastercard, Amex etc.) are increasing pressure on merchants to adopt 3DS for certain transaction types; sometimes they offer incentives (lower fraud rates, better interchange) or impose penalties for not using it.

  • PCI SSC has introduced separate but related standard PCI 3DS (Core Security Standard for EMV 3DS) in addition to PCI DSS. This formalizes security requirements around 3D Secure environments.

Best Practices: How to Use Both Together

If you decide (or are required) to use both PCI DSS and 3D Secure, here are some practices to help you maximize security and minimize friction:

  1. Scope your PCI DSS properly
    Identify what part of your systems store, process or transmit cardholder data. Segment networks, limit access, use encryption.
  2. Choose a modern version of 3DS
    Use EMV 3-D Secure rather than older versions. Leverage risk-based / frictionless flow so that low‐risk transactions can avoid extra steps.
  3. Monitor metrics
    Watch cart abandonment, conversion rates, authentication failure rates. Optimize challenge flows.
  4. Prepare fallback flows
    If issuer doesn’t support 3DS or the authentication fails, have secure fallback options (e.g. leveraging fraud detection, manual review etc.).
  5. Keep everything updated
    Apply regular patches, vulnerability scans, penetration testing for your PCI DSS environment. Update your 3DS integration as specs evolve.
  6. Work with trusted payment service providers / gateways
    If you use PSPs, ensure they are compliant with PCI DSS and support robust 3DS. Sometimes outsourcing part of the compliance can reduce your burden.
  7. Educate and train staff
    For PCI DSS especially, policies, access control, secure operations depend on people. Fraud awareness, secure development practices etc.

Conclusion

So, do you need both PCI DSS and 3D Secure for card payment security? In almost all serious commerce scenarios, the answer is yes—or at least you will benefit substantially from having both.

  • PCI DSS helps you secure the data environment: protect cardholder data, avoid breaches, meet baseline security and regulatory obligations.

  • 3D Secure adds an authentication layer to prevent fraudulent transactions in card-not-present situations.

They are complementary: one deals with data protection and system security, the other with transactional authentication and fraud prevention. If your business handles online payments, especially cross-border or large value, combining both gives you the best security posture, aligns with regulatory/industry expectations, and reduces financial & reputational risk.